Sequence Similarity Clusters for the Entities in PDB 1M0D

Entity #1 | Chains: A,B,C,D
Endodeoxyribonuclease I protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5480
95 % 1 4 4889 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.0
PDBFlex
90 % 1 5 2622
70 % 1 5 2605
50 % 1 5 2600
40 % 1 5 2541
30 % 1 5 2382

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures