Sequence Similarity Clusters for the Entities in PDB 1M04

Entity #1 | Chains: A
Beta-N-acetylhexosaminidase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53119
95 % 4 8 8600 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 11 5215
70 % 7 11 5092
50 % 7 11 4860
40 % 16 20 2781
30 % 16 21 2521

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures