Sequence Similarity Clusters for the Entities in PDB 1M01

Entity #1 | Chains: A
Beta-N-acetylhexosaminidase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 8868
95 % 5 8 8895 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 8 11 5762
70 % 8 11 5633
50 % 8 11 5350
40 % 17 20 2993
30 % 17 21 2641

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JAK 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
2 5FD0 1 A B-N-acetylhexosaminidase 1922
3 1M03 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
4 1M04 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
5 1M01 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
6 1HP5 1 A BETA-N-ACETYLHEXOSAMINIDASE 1922 3.2.1.52 | Details
7 1HP4 1 A BETA-N-ACETYLHEXOSAMINIDASE 1922 3.2.1.52 | Details
8 5FCZ 1 A B-N-acetylhexosaminidase 1922