Sequence Similarity Clusters for the Entities in PDB 1M01

Entity #1 | Chains: A
Beta-N-acetylhexosaminidase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 11709
95 % 5 8 8600 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 8 11 5215
70 % 8 11 5092
50 % 8 11 4860
40 % 17 20 2781
30 % 17 21 2521

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JAK 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
2 4C7G 1 A BETA-N-ACETYLHEXOSAMINIDASE RESIDUES 42-535 1902 3.2.1.52 | Details
3 4C7D 1 A, B BETA-N-ACETYLHEXOSAMINIDASE RESIDUES 42-535 1902 3.2.1.52 | Details
4 5FD0 1 A B-N-acetylhexosaminidase 1922
5 4C7F 1 A, B BETA-N-ACETYLHEXOSAMINIDASE RESIDUES 42-535 1902 3.2.1.52 | Details
6 1M03 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
7 1M04 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
8 1M01 1 A Beta-N-acetylhexosaminidase 1922 3.2.1.52 | Details
9 1HP5 1 A BETA-N-ACETYLHEXOSAMINIDASE 1922 3.2.1.52 | Details
10 1HP4 1 A BETA-N-ACETYLHEXOSAMINIDASE 1922 3.2.1.52 | Details
11 5FCZ 1 A B-N-acetylhexosaminidase 1922