Sequence Similarity Clusters for the Entities in PDB 1LZW

Entity #1 | Chains: A
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46697
95 % 10 12 2599 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 10 12 2648
70 % 10 12 2634
50 % 10 12 2598
40 % 10 12 2553
30 % 10 12 2417
Entity #2 | Chains: B
ATP-dependent clp protease ATP-binding subunit ClpA protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 4387
95 % 8 9 5176 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 8 9 5200
70 % 8 9 5111
50 % 8 9 4885
40 % 8 9 4625
30 % 8 9 4236

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.