Sequence Similarity Clusters for the Entities in PDB 1LYN

Entity #1 | Chains: A,B
SPERM LYSIN protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 2275
95 % 10 11 2447 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.0
PDBFlex
90 % 10 11 2509
70 % 10 11 2504
50 % 11 12 2258
40 % 11 12 2240
30 % 11 12 2151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures