Sequence Similarity Clusters for the Entities in PDB 1LYN

Entity #1 | Chains: A,B
SPERM LYSIN protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 1858
95 % 10 11 2347 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.9
PDBFlex
90 % 10 11 2412
70 % 10 11 2415
50 % 11 12 2208
40 % 11 12 2198
30 % 11 12 2099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures