Sequence Similarity Clusters for the Entities in PDB 1LYL

Entity #1 | Chains: A,B,C
LYSYL-TRNA SYNTHETASE (LYSU) protein, length: 504 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 10282
95 % 5 5 10308 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 5 10181
70 % 5 7 7398
50 % 9 11 2700
40 % 19 25 689
30 % 19 25 680

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures