Sequence Similarity Clusters for the Entities in PDB 1LYL

Entity #1 | Chains: A,B,C
LYSYL-TRNA SYNTHETASE (LYSU) protein, length: 504 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 9841
95 % 5 5 9889 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 5 9776
70 % 5 7 7063
50 % 9 11 2578
40 % 16 22 776
30 % 16 22 771

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.