Sequence Similarity Clusters for the Entities in PDB 1LYA

Entity #1 | Chains: A,C
CATHEPSIN D protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 4045
95 % 3 6 4803
90 % 3 6 4819
70 % 3 6 4755
50 % 3 6 4574
40 % 3 6 4353
30 % 3 6 3986
Entity #2 | Chains: B,D
CATHEPSIN D protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 3969
95 % 3 6 4714
90 % 3 6 4729
70 % 3 6 4650
50 % 3 6 4481
40 % 3 6 4261
30 % 3 6 3910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.