Sequence Similarity Clusters for the Entities in PDB 1LYA

Entity #1 | Chains: A,C
CATHEPSIN D protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 4312
95 % 3 6 5109
90 % 3 6 5121
70 % 3 6 5066
50 % 3 6 4853
40 % 3 6 4595
30 % 3 6 4207
Entity #2 | Chains: B,D
CATHEPSIN D protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 4228
95 % 3 6 5016
90 % 3 6 5032
70 % 3 6 4962
50 % 3 6 4753
40 % 3 6 4498
30 % 3 6 4126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.