Sequence Similarity Clusters for the Entities in PDB 1LY9

Entity #1 | Chains: A,B
Peroxidase protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19036
95 % 16 19 2504 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 16 19 2565
70 % 16 19 2554
50 % 56 70 639
40 % 56 70 671
30 % 56 70 666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures