Sequence Similarity Clusters for the Entities in PDB 1LWT

Entity #1 | Chains: B
PI-SceI DNA substrate top strand dna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
PI-SceI DNA substrate bottom strand dna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
ENDONUCLEASE PI-SCEI protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 10244
95 % 6 7 6329
90 % 6 7 6323
70 % 6 7 6166
50 % 6 7 5762
40 % 6 7 5412
30 % 6 7 4849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures