Sequence Similarity Clusters for the Entities in PDB 1LWF

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15495
95 % 159 258 115 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 159 258 119
70 % 159 258 133
50 % 160 259 161
40 % 160 260 172
30 % 160 260 190
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 24000
95 % 154 252 120 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 154 252 123
70 % 154 252 140
50 % 155 254 169
40 % 155 254 182
30 % 155 254 201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures