Sequence Similarity Clusters for the Entities in PDB 1LWE

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51657
95 % 121 252 92 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 121 252 97
70 % 121 252 114
50 % 122 253 152
40 % 122 254 165
30 % 122 254 179
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53158
95 % 117 246 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 117 246 120
70 % 117 246 136
50 % 118 248 159
40 % 118 248 176
30 % 118 248 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures