Sequence Similarity Clusters for the Entities in PDB 1LW0

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30681
95 % 117 238 104 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 117 238 109
70 % 117 238 124
50 % 118 239 152
40 % 118 239 170
30 % 118 239 184
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31975
95 % 113 232 115
90 % 113 232 118
70 % 113 232 135
50 % 114 233 161
40 % 114 233 178
30 % 114 233 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.