Sequence Similarity Clusters for the Entities in PDB 1LW0

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30246
95 % 116 236 106 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 116 236 110
70 % 116 236 126
50 % 117 237 152
40 % 117 237 169
30 % 117 237 184
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31511
95 % 112 230 114 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.6
PDBFlex
90 % 112 230 118
70 % 112 230 138
50 % 113 231 162
40 % 113 231 178
30 % 113 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.