Sequence Similarity Clusters for the Entities in PDB 1LVO

Entity #1 | Chains: A,B,C,D,E,F
Replicase, hydrolase domain protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 2845
95 % 1 4 3542 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 2 6 2741
70 % 2 6 2722
50 % 5 14 1467
40 % 47 119 235
30 % 47 119 245

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures