Sequence Similarity Clusters for the Entities in PDB 1LVM

Entity #1 | Chains: A,B
CATALYTIC DOMAIN OF THE NUCLEAR INCLUSION PROTEIN A (NIA) protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37855
95 % 1 3 11674
90 % 1 3 11508
70 % 1 3 10856
50 % 2 4 7548
40 % 2 4 6942
30 % 2 4 6117
Entity #2 | Chains: C,D
OLIGOPEPTIDE SUBSTRATE FOR THE PROTEASE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: E
CATALYTIC DOMAIN OF THE NUCLEAR INCLUSION PROTEIN A (NIA) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.