Sequence Similarity Clusters for the Entities in PDB 1LVF

Entity #1 | Chains: A,B
syntaxin 6 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46724
95 % 2 2 20402 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.1
PDBFlex
90 % 2 2 19836
70 % 2 2 18234
50 % 2 2 15827
40 % 2 2 14101
30 % 2 2 12064

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures