Sequence Similarity Clusters for the Entities in PDB 1LVE

Entity #1 | Chains: A
LEN, A VARIABLE DOMAIN FROM KAPPA-4 TYPE protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46374
95 % 5 9 5267 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 5 9 5287
70 % 47 191 73
50 % 72 308 22
40 % 223 934 5
30 % 248 1062 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures