Sequence Similarity Clusters for the Entities in PDB 1LVB

Entity #1 | Chains: A,B
CATALYTIC DOMAIN OF THE NUCLEAR INCLUSION PROTEIN A (NIA) protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21028
95 % 2 3 12510 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 2 3 12333
70 % 2 3 11644
50 % 3 4 8046
40 % 3 4 7405
30 % 3 4 6532
Entity #2 | Chains: C,D
OLIGOPEPTIDE SUBSTRATE FOR THE PROTEASE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures