Sequence Similarity Clusters for the Entities in PDB 1LVA

Entity #1 | Chains: A
Selenocysteine-specific elongation factor protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27463
95 % 1 3 14419 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 5.6
PDBFlex
90 % 1 3 14198
70 % 1 3 13348
50 % 1 3 11866
40 % 1 3 10753
30 % 1 3 9360

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures