Sequence Similarity Clusters for the Entities in PDB 1LTT

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN, SUBUNIT B protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 19 217
95 % 16 22 255 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 45 55 77
70 % 48 58 84
50 % 48 58 117
40 % 48 58 140
30 % 48 58 145
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15514
95 % 4 7 10599 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 7 10456
70 % 6 11 6270
50 % 7 12 5427
40 % 7 12 5101
30 % 7 12 4599
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 10952
95 % 4 7 10939 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 4 7 10794
70 % 4 7 10237
50 % 4 8 8530
40 % 4 8 7819
30 % 4 8 6903

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5ELB 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin B subunit 666
2 5LZG 1 A, B, C, D, E Cholera enterotoxin subunit B 666
3 5LZH 1 A, B, D Cholera enterotoxin B subunit 666
4 5LZH 2 C, E Cholera enterotoxin B subunit 666
5 3CHB 1 D, E, F, G, H CHOLERA TOXIN RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY GM1 PENTASACCHARIDE B-PENTAMER 666
6 1JR0 1 D, E, F, G, H cholera toxin B subunit 666
7 5LZJ 1 A, B, C, D, E Cholera enterotoxin subunit B 666
8 1DJR 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B PENTAMER 562
9 1RDP 1 D, E, F, G, H cholera toxin B protein (CTB) 666
10 1PZK 1 D, E, F, G, H Cholera Toxin B Subunit 666
11 1RF2 1 D, E, F, G, H cholera toxin B protein (CTB) 666
12 1PZJ 1 D, E, F, G, H Cholera Toxin B Subunit 666
13 1MD2 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT 666
14 1RD9 1 D, E, F, G, H cholera toxin B protein (CTB) 666
15 5ELD 1 A, B, C, D, E Cholera enterotoxin B subunit 666
16 1LLR 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT 666
17 5LZI 1 A, B, C, D, E Heat-labile enterotoxin B chain 562
18 5ELF 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
19 1RCV 1 D, E, F, G, H cholera toxin B protein (CTB) 666
20 5ELC 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
21 5ELE 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
22 1EFI 1 D, E, F, G, H PROTEIN (HEAT-LABILE ENTEROTOXIN B CHAIN) 562
23 1LT5 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B-PENTAMER 562
24 1S5D 2 D, E, F, G, H cholera toxin B protein (CTB) 666
25 4L63 2 B, C, D, E, F ECXB 562
26 1EEF 1 D, E, F, G, H, L, M, N, O, P PROTEIN (HEAT-LABILE ENTEROTOXIN B CHAIN) 562
27 1FD7 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B CHAIN 562
28 4L6T 2 B, C, D, E, F ECXB 562
29 1S5E 2 D, E, F, G, H, J, K, L, M, N cholera toxin B protein (CTB) 666
30 2XRS 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B CHAIN PORCINE ENTEROTOXIN PLT B SUBUNIT CONTAINS LINEAR NEOLACTOTETRAOSE GAL BETA4 GLCNAC BETA3 GAL BETA4 562
31 2WV6 1 D, E, F, G, H, I, J, K, L, M CFXB B SUBUNIT, RESIDUES 23-125 546
32 1PZI 1 D, E, F, G, H Heat-labile Enterotoxin B subunit 562
33 3EFX 1 D, E, F, G, H, I, J, K, L, M Cholera enterotoxin subunit B, Heat-labile enterotoxin B chain 666
34 1LTS 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
35 2CHB 1 D, E, F, G, H CHOLERA TOXIN RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY GM1 PENTASACCHARIDE B-PENTAMER 666
36 1CHP 1 D, E, F, G, H CHOLERA TOXIN B PENTAMER 666
37 1G8Z 1 D, E, F, G, H CHOLERA TOXIN B PROTEIN 666
38 1LT3 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN LACTOSE BOUND HOLOTOXIN 562
39 1LT4 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN LACTOSE HOLOTOXIN 562
40 1EEI 1 D, E, F, G, H PROTEIN (CHOLERA TOXIN B) RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY METANITROPHENYL-ALPHA-D-GALACTOSIDE 666
41 1S5B 2 D, E, F, G, H cholera toxin B protein (CTB) 666
42 1LTI 1 D, E, F, G, H HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
43 1LTA 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
44 1LT6 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B-PENTAMER 562
45 1CHQ 1 D, E, F, G, H CHOLERA TOXIN B PENTAMER 666
46 1JQY 1 D, E, F, G, H, L, M, N, O, P, V, W, X, Y, Z HEAT-LABILE ENTEROTOXIN B CHAIN 562
47 1CT1 1 D, E, F, G, H CHOLERA TOXIN B-PENTAMER 666
48 1LTT 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
49 1FGB 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT PENTAMER 666
50 1LTG 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN 562
51 1XTC 3 D, E, F, G, H CHOLERA TOXIN 666
52 1LTB 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
53 2O2L 1 D, E, F, G, H, I, J, K, L, M Heat-labile enterotoxin B chain 562
54 2XRQ 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B CHAIN PORCINE ENTEROTOXIN PLT B-SUBUNIT CONTAINING GM1 PENTASACCHARIDE(GAL-BETA3-GALNAC-BETA4 (NEUAC ALPHA3)-GAL-BETA4 -GLC RESIDUES 22-124 562
55 1S5C 2 D, E, F, G, H cholera enterotoxin B-subunit 666
56 1HTL 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
57 1S5F 2 D, E, F, G, H cholera toxin B protein (CTB) 666
58 1LTR 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN THE B SUBUNIT HAS A PEPTIDE WITH ANTI-HSV ACTIVITY AS AN EXTENSION, RESIDUES 104-113 SUBUNIT B-R2 562