Sequence Similarity Clusters for the Entities in PDB 1LTT

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN, SUBUNIT B protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 19 193
95 % 15 21 228
90 % 39 50 72
70 % 42 53 80
50 % 42 53 110
40 % 42 53 133
30 % 42 53 144
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 14083
95 % 4 7 9645
90 % 4 7 9529
70 % 6 11 5674
50 % 7 12 4946
40 % 7 12 4668
30 % 7 12 4220
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 9948
95 % 4 7 9957
90 % 4 7 9835
70 % 4 7 9324
50 % 4 8 7805
40 % 4 8 7182
30 % 4 8 6357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.