Sequence Similarity Clusters for the Entities in PDB 1LTQ

Entity #1 | Chains: A
POLYNUCLEOTIDE KINASE protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 4075
95 % 1 5 4422 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 1 5 4467
70 % 1 5 4362
50 % 1 5 4211
40 % 1 5 3983
30 % 1 7 2918

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures