Sequence Similarity Clusters for the Entities in PDB 1LTO

Entity #1 | Chains: A,B,C,D
alpha tryptase I protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21271
95 % 3 4 4271 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 15 23 619
70 % 15 23 663
50 % 15 23 714
40 % 1472 1863 4
30 % 1482 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures