Sequence Similarity Clusters for the Entities in PDB 1LTM

Entity #1 | Chains: A
36 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 8222
95 % 2 8 8543 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 8 8478
70 % 2 8 8145
50 % 2 8 7415
40 % 2 9 6130
30 % 2 9 5490

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.