Sequence Similarity Clusters for the Entities in PDB 1LTI

Entity #1 | Chains: D,E,F,G,H
HEAT LABILE ENTEROTOXIN TYPE I protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 19 204
95 % 11 21 247
90 % 34 50 75
70 % 37 53 83
50 % 37 53 116
40 % 37 53 137
30 % 37 53 148
Entity #2 | Chains: A
HEAT LABILE ENTEROTOXIN TYPE I protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 14607
95 % 2 7 9973
90 % 2 7 9846
70 % 4 11 5894
50 % 4 12 5114
40 % 4 12 4813
30 % 4 12 4344
Entity #3 | Chains: C
HEAT LABILE ENTEROTOXIN TYPE I protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 10299
95 % 2 7 10293
90 % 2 7 10161
70 % 2 7 9640
50 % 2 8 8070
40 % 2 8 7400
30 % 2 8 6538

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.