Sequence Similarity Clusters for the Entities in PDB 1LTG

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 261
95 % 17 22 286 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 47 55 113
70 % 50 58 109
50 % 50 58 141
40 % 50 58 156
30 % 50 58 172
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54840
95 % 5 7 12129 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11942
70 % 7 11 7028
50 % 8 12 6142
40 % 8 12 5717
30 % 8 12 5013
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 12611
95 % 5 7 12154 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 5 7 11966
70 % 5 7 11296
50 % 5 8 9342
40 % 5 8 8462
30 % 5 8 7317

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LTS 3 C HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
2 1LTI 3 C HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
3 1LTA 3 C HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
4 1LTT 3 C HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
5 1LTG 3 C HEAT-LABILE ENTEROTOXIN 562
6 1LTB 3 C HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
7 1HTL 3 C HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562