Sequence Similarity Clusters for the Entities in PDB 1LTG

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 231
95 % 17 22 262 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 47 55 82
70 % 50 58 91
50 % 50 58 125
40 % 50 58 145
30 % 50 58 152
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64054
95 % 5 7 10956 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 10809
70 % 7 11 6458
50 % 8 12 5582
40 % 8 12 5238
30 % 8 12 4726
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 11336
95 % 5 7 11300 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 5 7 11155
70 % 5 7 10571
50 % 5 8 8787
40 % 5 8 8049
30 % 5 8 7101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LTS 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
2 1LTI 2 A HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
3 1LTA 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
4 1LTT 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
5 1LTG 2 A HEAT-LABILE ENTEROTOXIN 562
6 1LTB 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
7 1HTL 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562