Sequence Similarity Clusters for the Entities in PDB 1LTG

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 257
95 % 17 22 281 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 47 55 110
70 % 50 58 104
50 % 50 58 137
40 % 50 58 152
30 % 50 58 167
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54289
95 % 5 7 11997 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11815
70 % 7 11 6966
50 % 8 12 6091
40 % 8 12 5667
30 % 8 12 4966
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 12484
95 % 5 7 12022 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 5 7 11840
70 % 5 7 11184
50 % 5 8 9265
40 % 5 8 8392
30 % 5 8 7250

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LTS 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
2 1LTI 2 A HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
3 1LTA 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
4 1LTT 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
5 1LTG 2 A HEAT-LABILE ENTEROTOXIN 562
6 1LTB 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
7 1HTL 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562