Sequence Similarity Clusters for the Entities in PDB 1LTG

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 253
95 % 17 22 276 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 47 55 85
70 % 50 58 97
50 % 50 58 131
40 % 50 58 148
30 % 50 58 161
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53295
95 % 5 7 11719 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11547
70 % 7 11 6824
50 % 8 12 5991
40 % 8 12 5586
30 % 8 12 4898
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 12181
95 % 5 7 11741 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 5 7 11568
70 % 5 7 10957
50 % 5 8 9104
40 % 5 8 8260
30 % 5 8 7151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LTS 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
2 1LTI 2 A HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
3 1LTA 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
4 1LTT 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
5 1LTG 2 A HEAT-LABILE ENTEROTOXIN 562
6 1LTB 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562
7 1HTL 2 A HEAT-LABILE ENTEROTOXIN, SUBUNIT A 562