Sequence Similarity Clusters for the Entities in PDB 1LTG

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 214
95 % 17 22 249 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 47 55 74
70 % 50 58 80
50 % 50 58 113
40 % 50 58 135
30 % 50 58 144
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61475
95 % 5 7 10467
90 % 5 7 10334
70 % 7 11 6184
50 % 8 12 5355
40 % 8 12 5028
30 % 8 12 4537
Entity #3 | Chains: C
HEAT-LABILE ENTEROTOXIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10800
95 % 5 7 10804 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 5 7 10670
70 % 5 7 10131
50 % 5 8 8435
40 % 5 8 7729
30 % 5 8 6829

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.