Sequence Similarity Clusters for the Entities in PDB 1LT9

Entity #1 | Chains: A,D
Fibrinogen alpha/alpha-E chain protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 2179
95 % 8 11 2824
90 % 8 11 2866
70 % 8 11 2836
50 % 8 11 2799
40 % 8 11 2756
30 % 8 11 2577
Entity #2 | Chains: B,E
Fibrinogen beta chain protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 656
95 % 15 28 793
90 % 15 28 821
70 % 15 28 859
50 % 15 30 813
40 % 15 30 849
30 % 29 61 390
Entity #3 | Chains: C,F
Fibrinogen gamma chain protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 23 706
95 % 15 29 755
90 % 15 29 787
70 % 15 29 827
50 % 15 31 785
40 % 15 31 822
30 % 30 61 390

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.