Sequence Similarity Clusters for the Entities in PDB 1LT9

Entity #1 | Chains: A,D
Fibrinogen alpha/alpha-E chain protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 2092
95 % 8 11 2728
90 % 8 11 2772
70 % 8 11 2744
50 % 8 11 2702
40 % 8 11 2671
30 % 8 11 2493
Entity #2 | Chains: B,E
Fibrinogen beta chain protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 635
95 % 15 28 766
90 % 15 28 793
70 % 15 28 832
50 % 15 30 773
40 % 15 30 812
30 % 29 61 356
Entity #3 | Chains: C,F
Fibrinogen gamma chain protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 23 681
95 % 15 29 734
90 % 15 29 763
70 % 15 29 804
50 % 15 31 749
40 % 15 31 786
30 % 30 61 356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.