Sequence Similarity Clusters for the Entities in PDB 1LT4

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 19 231
95 % 11 22 262 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 36 55 82
70 % 39 58 91
50 % 39 58 125
40 % 39 58 145
30 % 39 58 152
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60364
95 % 2 2 30862 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 29759
70 % 4 7 8976
50 % 4 7 8136
40 % 4 7 7485
30 % 4 7 6603

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures