Sequence Similarity Clusters for the Entities in PDB 1LT4

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 19 217
95 % 11 22 255 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 36 55 77
70 % 39 58 83
50 % 39 58 116
40 % 39 58 139
30 % 39 58 146
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58508
95 % 2 2 29903 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 28862
70 % 4 7 8696
50 % 4 7 7882
40 % 4 7 7250
30 % 4 7 6398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.