Sequence Similarity Clusters for the Entities in PDB 1LT4

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 19 210
95 % 11 22 244 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 36 55 73
70 % 39 58 81
50 % 39 58 109
40 % 39 58 134
30 % 39 58 142
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56940
95 % 2 2 29057
90 % 2 2 28054
70 % 4 7 8435
50 % 4 7 7649
40 % 4 7 7041
30 % 4 7 6214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.