Sequence Similarity Clusters for the Entities in PDB 1LT3

Entity #1 | Chains: D,E,F,G,H
HEAT-LABILE ENTEROTOXIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 19 223
95 % 10 22 259 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 35 55 81
70 % 38 58 89
50 % 38 58 119
40 % 38 58 143
30 % 38 58 148
Entity #2 | Chains: A
HEAT-LABILE ENTEROTOXIN protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59942
95 % 1 2 30465 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29385
70 % 3 7 8836
50 % 3 7 8015
40 % 3 7 7374
30 % 3 7 6508

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures