Sequence Similarity Clusters for the Entities in PDB 1LST

Entity #1 | Chains: A
LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15823
95 % 2 7 10854 Flexibility: Medium
Max RMSD: 4.8, Avg RMSD: 3.2
PDBFlex
90 % 2 7 10697
70 % 2 10 6404
50 % 2 10 5968
40 % 2 10 5555
30 % 28 82 389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures