Sequence Similarity Clusters for the Entities in PDB 1LST

Entity #1 | Chains: A
LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14828
95 % 1 5 13948 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.0
PDBFlex
90 % 1 5 13714
70 % 1 8 7295
50 % 1 8 6723
40 % 1 8 6251
30 % 26 65 471

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.