Sequence Similarity Clusters for the Entities in PDB 1LSS

Entity #1 | Chains: A,B,C,D
Trk system potassium uptake protein trkA homolog protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22956
95 % 1 1 19742 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 19212
70 % 1 1 17701
50 % 1 1 15375
40 % 1 1 13691
30 % 1 1 11715

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.