Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48721
95 % 1 1 36448
90 % 1 1 34844
70 % 1 1 31115
50 % 1 1 26699
40 % 1 1 23644
30 % 1 1 20158
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54261
95 % 1 1 39024
90 % 1 1 37311
70 % 1 1 33234
50 % 1 1 28434
40 % 1 1 25119
30 % 1 1 21351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.