Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49954
95 % 1 1 37368
90 % 1 1 35691
70 % 1 1 31777
50 % 1 1 27227
40 % 1 1 24105
30 % 1 1 20561
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55674
95 % 1 1 40048
90 % 1 1 38257
70 % 1 1 33983
50 % 1 1 29038
40 % 1 1 25644
30 % 1 1 21805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.