Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65684
95 % 1 1 53222
90 % 1 1 50444
70 % 1 1 44090
50 % 1 1 37382
40 % 1 1 32704
30 % 1 1 27343
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65686
95 % 1 1 53223
90 % 1 1 50445
70 % 1 1 44091
50 % 1 1 37384
40 % 1 1 32706
30 % 1 1 27344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures