Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50722
95 % 1 1 37910
90 % 1 1 36186
70 % 1 1 32196
50 % 1 1 27571
40 % 1 1 24406
30 % 1 1 20803
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56531
95 % 1 1 40632
90 % 1 1 38792
70 % 1 1 34435
50 % 1 1 29412
40 % 1 1 25966
30 % 1 1 22063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures