Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46648
95 % 1 1 34895
90 % 1 1 33411
70 % 1 1 29901
50 % 1 1 25705
40 % 1 1 22767
30 % 1 1 19416
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51976
95 % 1 1 37374
90 % 1 1 35792
70 % 1 1 31945
50 % 1 1 27383
40 % 1 1 24197
30 % 1 1 20574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.