Sequence Similarity Clusters for the Entities in PDB 1LSH

Entity #1 | Chains: A
LIPOVITELLIN (LV-1N, LV-1C) protein, length: 1056 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49404
95 % 1 1 36955
90 % 1 1 35310
70 % 1 1 31470
50 % 1 1 26965
40 % 1 1 23880
30 % 1 1 20369
Entity #2 | Chains: B
LIPOVITELLIN (LV-2) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55043
95 % 1 1 39594
90 % 1 1 37838
70 % 1 1 33646
50 % 1 1 28750
40 % 1 1 25395
30 % 1 1 21591

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.