Sequence Similarity Clusters for the Entities in PDB 1LS3

Entity #1 | Chains: A,B,C,D
Serine Hydroxymethyltransferase protein, length: 483 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8690
95 % 3 6 5235 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 4 8 3590
70 % 4 8 3534
50 % 15 19 1442
40 % 92 100 260
30 % 92 102 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures