Sequence Similarity Clusters for the Entities in PDB 1LS2

Entity #1 | Chains: B
Phenylalanine transfer RNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Elongation Factor Tu protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 36 784
95 % 37 39 975
90 % 37 39 1008
70 % 66 68 463
50 % 68 70 491
40 % 68 70 532
30 % 94 96 404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures