Sequence Similarity Clusters for the Entities in PDB 1LS2

Entity #1 | Chains: B
Phenylalanine transfer RNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Elongation Factor Tu protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 36 776
95 % 37 39 965
90 % 37 39 998
70 % 66 68 446
50 % 68 70 484
40 % 68 70 527
30 % 94 96 396

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures