Sequence Similarity Clusters for the Entities in PDB 1LRW

Entity #1 | Chains: A,C
methanol dehydrogenase subunit 1 protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31923
95 % 1 1 26172 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 25283
70 % 5 6 2971
50 % 11 12 1780
40 % 11 12 1783
30 % 12 13 1651
Entity #2 | Chains: B,D
methanol dehydrogenase subunit 2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48898
95 % 1 1 36470 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 34809
70 % 1 1 30923
50 % 1 1 26414
40 % 1 1 23294
30 % 1 1 19721

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures