Sequence Similarity Clusters for the Entities in PDB 1LRW

Entity #1 | Chains: A,C
methanol dehydrogenase subunit 1 protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32308
95 % 1 1 26482 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 25576
70 % 6 7 2769
50 % 13 14 1498
40 % 13 14 1498
30 % 14 15 1398
Entity #2 | Chains: B,D
methanol dehydrogenase subunit 2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49468
95 % 1 1 36886 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 35193
70 % 1 1 31252
50 % 1 1 26683
40 % 1 1 23535
30 % 1 1 19928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures