Sequence Similarity Clusters for the Entities in PDB 1LRW

Entity #1 | Chains: A,C
methanol dehydrogenase subunit 1 protein, length: 600 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30442
95 % 1 1 24990 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 24172
70 % 5 6 2835
50 % 11 12 1692
40 % 11 12 1698
30 % 12 13 1570
Entity #2 | Chains: B,D
methanol dehydrogenase subunit 2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46882
95 % 1 1 35017 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 33475
70 % 1 1 29848
50 % 1 1 25559
40 % 1 1 22545
30 % 1 1 19092

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.