Sequence Similarity Clusters for the Entities in PDB 1LQV

Entity #1 | Chains: A,B
Endothelial protein C receptor protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15798
95 % 1 3 14793 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14520
70 % 1 3 13618
50 % 1 3 12103
40 % 1 3 10964
30 % 1 3 9531
Entity #2 | Chains: C,D
Vitamin-K dependent protein C protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25245
95 % 1 2 21497 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 2 20873
70 % 1 2 19165
50 % 1 2 16646
40 % 1 2 14843
30 % 1 2 12716

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures