Sequence Similarity Clusters for the Entities in PDB 1LQV

Entity #1 | Chains: A,B
Endothelial protein C receptor protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16080
95 % 1 3 15031 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14748
70 % 1 3 13821
50 % 1 3 12273
40 % 1 3 11107
30 % 1 3 9658
Entity #2 | Chains: C,D
Vitamin-K dependent protein C protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25633
95 % 1 2 21816 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 2 21175
70 % 1 2 19430
50 % 1 2 16861
40 % 1 2 15029
30 % 1 2 12877

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures