Sequence Similarity Clusters for the Entities in PDB 1LQV

Entity #1 | Chains: A,B
Endothelial protein C receptor protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15459
95 % 1 3 14523 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14248
70 % 1 3 13367
50 % 1 3 11889
40 % 1 3 10771
30 % 1 3 9363
Entity #2 | Chains: C,D
Vitamin-K dependent protein C protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24708
95 % 1 2 21086 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 2 20499
70 % 1 2 18810
50 % 1 2 16352
40 % 1 2 14595
30 % 1 2 12507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.