Sequence Similarity Clusters for the Entities in PDB 1LQV

Entity #1 | Chains: A,B
Endothelial protein C receptor protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16175
95 % 1 3 15253 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14940
70 % 1 3 13975
50 % 1 3 12346
40 % 1 3 11078
30 % 1 3 9419
Entity #2 | Chains: C,D
Vitamin-K dependent protein C protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19875
95 % 1 2 18039 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 1 2 17586
70 % 1 2 16273
50 % 1 2 15162
40 % 1 2 13484
30 % 1 2 11334

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures