Sequence Similarity Clusters for the Entities in PDB 1LQS

Entity #1 | Chains: R,S
INTERLEUKIN-10 RECEPTOR ALPHA CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12937
95 % 3 5 12447 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 5 12244
70 % 3 5 11532
50 % 3 5 10309
40 % 3 5 9346
30 % 3 5 8148
Entity #2 | Chains: L,M
INTERLEUKIN-10-LIKE PROTEIN protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43645
95 % 1 1 32957 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 31516
70 % 1 1 28120
50 % 1 1 23989
40 % 1 1 21110
30 % 1 1 17886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.