Sequence Similarity Clusters for the Entities in PDB 1LQS

Entity #1 | Chains: R,S
INTERLEUKIN-10 RECEPTOR ALPHA CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12465
95 % 3 5 11989 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 3 5 11795
70 % 3 5 11105
50 % 3 5 9961
40 % 3 5 9031
30 % 3 5 7864
Entity #2 | Chains: L,M
INTERLEUKIN-10-LIKE PROTEIN protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42221
95 % 1 1 31898 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 30531
70 % 1 1 27318
50 % 1 1 23359
40 % 1 1 20551
30 % 1 1 17401

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.