Sequence Similarity Clusters for the Entities in PDB 1LQS

Entity #1 | Chains: R,S
INTERLEUKIN-10 RECEPTOR ALPHA CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 13129
95 % 3 5 12615
90 % 3 5 12414
70 % 3 5 11697
50 % 3 5 10459
40 % 3 5 9478
30 % 3 5 8266
Entity #2 | Chains: L,M
INTERLEUKIN-10-LIKE PROTEIN protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44305
95 % 1 1 33438
90 % 1 1 31955
70 % 1 1 28487
50 % 1 1 24299
40 % 1 1 21375
30 % 1 1 18106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures