Sequence Similarity Clusters for the Entities in PDB 1LQM

Entity #1 | Chains: A,C,E,G
URACIL-DNA GLYCOSYLASE protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 3293
95 % 11 13 2426
90 % 11 13 2472
70 % 12 14 2323
50 % 39 43 770
40 % 66 71 490
30 % 67 72 488
Entity #2 | Chains: B,D,F,H
URACIL-DNA GLYCOSYLASE INHIBITOR protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 854
95 % 10 12 1178
90 % 10 12 1202
70 % 10 12 1234
50 % 10 12 1276
40 % 10 12 1294
30 % 10 12 1277

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.