Sequence Similarity Clusters for the Entities in PDB 1LQD

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 859
95 % 39 40 1163
90 % 39 40 1181
70 % 39 40 1203
50 % 60 74 623
40 % 60 74 666
30 % 60 74 660
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 118 172
95 % 112 133 166
90 % 112 133 180
70 % 112 134 211
50 % 620 658 10
40 % 1381 1567 3
30 % 1495 1707 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.