Sequence Similarity Clusters for the Entities in PDB 1LQD

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 833
95 % 39 40 1125
90 % 39 40 1138
70 % 39 40 1166
50 % 60 74 591
40 % 60 74 635
30 % 60 74 634
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 118 162
95 % 112 133 164
90 % 112 133 179
70 % 112 134 205
50 % 618 656 10
40 % 1375 1561 3
30 % 1485 1697 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.