Sequence Similarity Clusters for the Entities in PDB 1LQD

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 953
95 % 39 40 1279
90 % 39 40 1302
70 % 39 40 1331
50 % 60 74 696
40 % 60 74 734
30 % 60 74 726
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 100 119 203
95 % 113 134 236
90 % 113 134 248
70 % 113 135 281
50 % 627 668 13
40 % 1428 1623 4
30 % 1543 1765 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.