Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 789
95 % 5 20 1019
90 % 5 20 1042
70 % 5 20 1087
50 % 5 20 1136
40 % 5 20 1161
30 % 5 20 1134
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 36 206
95 % 7 37 290
90 % 7 37 304
70 % 7 37 325
50 % 7 37 348
40 % 7 37 380
30 % 7 38 381
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 261
95 % 4 24 376
90 % 4 24 399
70 % 4 24 430
50 % 4 24 498
40 % 4 24 533
30 % 4 24 537
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65662
95 % 1 1 45822
90 % 1 1 43649
70 % 1 1 38566
50 % 1 1 33071
40 % 1 1 29196
30 % 1 1 24725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.