Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 810
95 % 5 20 1058
90 % 5 20 1080
70 % 5 20 1124
50 % 5 20 1174
40 % 5 20 1192
30 % 5 20 1165
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 36 208
95 % 7 37 296
90 % 7 37 311
70 % 7 37 333
50 % 7 37 365
40 % 7 37 399
30 % 7 38 397
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 265
95 % 4 24 390
90 % 4 24 410
70 % 4 24 450
50 % 4 24 517
40 % 4 24 556
30 % 4 24 560
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67482
95 % 1 1 47040
90 % 1 1 44791
70 % 1 1 39511
50 % 1 1 33851
40 % 1 1 29856
30 % 1 1 25288

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.