Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 808
95 % 5 20 1056
90 % 5 20 1078
70 % 5 20 1120
50 % 5 20 1167
40 % 5 20 1185
30 % 5 20 1160
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 36 208
95 % 7 37 296
90 % 7 37 311
70 % 7 37 332
50 % 7 37 363
40 % 7 37 396
30 % 7 38 395
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 263
95 % 4 24 385
90 % 4 24 408
70 % 4 24 449
50 % 4 24 516
40 % 4 24 554
30 % 4 24 556
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67098
95 % 1 1 46783
90 % 1 1 44546
70 % 1 1 39290
50 % 1 1 33667
40 % 1 1 29695
30 % 1 1 25153

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.