Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 885
95 % 5 20 1128
90 % 5 20 1155
70 % 5 20 1198
50 % 5 20 1248
40 % 5 20 1263
30 % 5 20 1240
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 38 219
95 % 7 39 298
90 % 7 39 313
70 % 7 39 351
50 % 7 39 411
40 % 7 39 446
30 % 7 40 441
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 26 269
95 % 4 26 385
90 % 4 26 416
70 % 4 26 457
50 % 4 26 532
40 % 4 26 573
30 % 4 26 567
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71183
95 % 1 1 49570
90 % 1 1 47109
70 % 1 1 41408
50 % 1 1 35433
40 % 1 1 31243
30 % 1 1 26461

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.