Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 765
95 % 5 20 983
90 % 5 20 1008
70 % 5 20 1050
50 % 5 20 1104
40 % 5 20 1121
30 % 5 20 1099
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 36 199
95 % 7 37 278
90 % 7 37 291
70 % 7 37 313
50 % 7 37 334
40 % 7 37 366
30 % 7 38 371
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 258
95 % 4 24 370
90 % 4 24 393
70 % 4 24 417
50 % 4 24 464
40 % 4 24 503
30 % 4 24 506
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64027
95 % 1 1 44702
90 % 1 1 42616
70 % 1 1 37711
50 % 1 1 32354
40 % 1 1 28587
30 % 1 1 24225

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.