Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 802
95 % 5 20 1038
90 % 5 20 1061
70 % 5 20 1104
50 % 5 20 1153
40 % 5 20 1174
30 % 5 20 1150
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 36 208
95 % 7 37 292
90 % 7 37 306
70 % 7 37 328
50 % 7 37 356
40 % 7 37 390
30 % 7 38 388
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 262
95 % 4 24 383
90 % 4 24 408
70 % 4 24 441
50 % 4 24 512
40 % 4 24 547
30 % 4 24 551
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66596
95 % 1 1 46452
90 % 1 1 44235
70 % 1 1 39038
50 % 1 1 33468
40 % 1 1 29528
30 % 1 1 25020

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.