Sequence Similarity Clusters for the Entities in PDB 1LQB

Entity #1 | Chains: A
Elongin B protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 881
95 % 5 20 1126
90 % 5 20 1153
70 % 5 20 1190
50 % 5 20 1240
40 % 5 20 1254
30 % 5 20 1229
Entity #2 | Chains: B
Elongin C protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 38 218
95 % 7 39 295
90 % 7 39 310
70 % 7 39 347
50 % 7 39 410
40 % 7 39 442
30 % 7 40 437
Entity #3 | Chains: C
von hippel-lindau disease tumor supressor protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 26 268
95 % 4 26 383
90 % 4 26 414
70 % 4 26 454
50 % 4 26 530
40 % 4 26 570
30 % 4 26 564
Entity #4 | Chains: D
Hypoxia-inducible factor 1 ALPHA protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70699
95 % 1 1 49240
90 % 1 1 46803
70 % 1 1 41166
50 % 1 1 35247
40 % 1 1 31088
30 % 1 1 26346

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.