Sequence Similarity Clusters for the Entities in PDB 1LQ8

Entity #1 | Chains: A,C,E,G
plasma serine protease inhibitor protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5627
95 % 5 5 6280 Flexibility: Medium
Max RMSD: 11.5, Avg RMSD: 4.5
PDBFlex
90 % 5 5 6271
70 % 5 5 6118
50 % 27 48 888
40 % 62 97 378
30 % 93 178 184
Entity #2 | Chains: B,D,F,H
plasma serine protease inhibitor protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16210
95 % 2 2 15188 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 14902
70 % 2 2 13975
50 % 2 2 12406
40 % 2 2 11246
30 % 2 2 9775

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.