Sequence Similarity Clusters for the Entities in PDB 1LQ8

Entity #1 | Chains: A,C,E,G
plasma serine protease inhibitor protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5745
95 % 5 5 6391 Flexibility: Medium
Max RMSD: 11.5, Avg RMSD: 4.5
PDBFlex
90 % 5 5 6382
70 % 5 5 6224
50 % 27 48 902
40 % 62 97 405
30 % 93 178 189
Entity #2 | Chains: B,D,F,H
plasma serine protease inhibitor protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16565
95 % 2 2 15470 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 15188
70 % 2 2 14246
50 % 2 2 12634
40 % 2 2 11443
30 % 2 2 9945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures