Sequence Similarity Clusters for the Entities in PDB 1LPK

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 39 992
95 % 29 40 1330
90 % 29 40 1355
70 % 29 40 1373
50 % 40 74 746
40 % 40 74 780
30 % 40 74 774
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 119 210
95 % 75 134 249
90 % 75 134 264
70 % 75 135 291
50 % 564 678 14
40 % 1255 1684 4
30 % 1351 1833 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.