Sequence Similarity Clusters for the Entities in PDB 1LPK

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 39 857
95 % 29 40 1159
90 % 29 40 1175
70 % 29 40 1198
50 % 40 74 623
40 % 40 74 666
30 % 40 74 659
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 118 172
95 % 75 133 166
90 % 75 133 180
70 % 75 134 211
50 % 550 658 10
40 % 1156 1567 3
30 % 1251 1707 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.