Sequence Similarity Clusters for the Entities in PDB 1LPK

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 39 833
95 % 29 40 1125
90 % 29 40 1138
70 % 29 40 1166
50 % 40 74 591
40 % 40 74 635
30 % 40 74 632
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 118 162
95 % 75 133 164
90 % 75 133 179
70 % 75 134 205
50 % 548 656 10
40 % 1151 1561 3
30 % 1242 1697 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.