Sequence Similarity Clusters for the Entities in PDB 1LPJ

Entity #1 | Chains: A
Retinol-binding protein IV, cellular protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 44844
95 % 2 2 28830 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 27693
70 % 2 2 24919
50 % 44 54 552
40 % 158 216 155
30 % 529 771 23

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures