Sequence Similarity Clusters for the Entities in PDB 1LPG

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 40 1243
95 % 23 40 1468 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 23 40 1492
70 % 23 40 1505
50 % 31 74 814
40 % 31 74 845
30 % 32 79 791
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 136 215
95 % 56 136 273 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 56 136 285
70 % 56 137 329
50 % 546 712 14
40 % 1238 1897 4
30 % 1245 1911 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2Y5F 1 A ACTIVATED FACTOR XA HEAVY CHAIN RESIDUES 235-468 9606 3.4.21.6 | Details
2 2Y5G 1 A ACTIVATED FACTOR XA HEAVY CHAIN RESIDUES 235-468 9606 3.4.21.6 | Details
3 2JKH 1 A ACTIVATED FACTOR XA HEAVY CHAIN CATALYTIC, RESIDUES 235-475 9606 3.4.21.6 | Details
4 2Y5H 1 A ACTIVATED FACTOR XA HEAVY CHAIN RESIDUES 235-468 9606 3.4.21.6 | Details
5 3KL6 1 A Coagulation Factor X heavy chain Factor X heavy chain residues 235-475 9606 3.4.21.6 | Details
6 4Y6D 1 A Coagulation factor X 9606 3.4.21.6 | Details
7 3FFG 1 A Coagulation factor X, heavy chain sequence database residues 235-468 9606 3.4.21.6 | Details
8 2VWO 1 A ACTIVATED FACTOR XA HEAVY CHAIN PEPTIDASE S1 DOMAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
9 2VWN 1 A ACTIVATED FACTOR XA HEAVY CHAIN PEPTIDASE S1 DOMAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
10 2P3U 2 B Coagulation factor X CATALYTIC DOMAIN 9606 3.4.21.6 | Details
11 2PR3 1 A COAGULATION FACTOR X, HEAVY CHAIN HEAVY CHAIN 9606 3.4.21.6 | Details
12 2XBV 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
13 2BOK 1 A COAGULATION FACTOR X CATALYTIC DOMAIN, RESIDUES 234-475 9606 3.4.21.6 | Details
14 2Y81 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN 9606 3.4.21.6 | Details
15 2VH0 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
16 2XC5 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
17 2XC4 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
18 2XBW 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
19 2VVV 1 A ACTIVATED FACTOR XA HEAVY CHAIN CATALYTIC, RESIDUES 235-475 9606 3.4.21.6 | Details
20 2UWP 1 A COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
21 4Y7B 1 A Coagulation factor X Disulphide linked to other chain 9606 3.4.21.6 | Details
22 3CEN 1 A COAGULATION FACTOR X, HEAVY CHAIN Activated factor Xa heavy chain, UNP residues 235-468 9606 3.4.21.6 | Details
23 2UWO 1 A COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
24 2J4I 1 A COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
25 2VWL 1 A ACTIVATED FACTOR XA HEAVY CHAIN PEPTIDASE S1, RESIDUES 235-475 9606 3.4.21.6 | Details
26 4Y71 1 A Coagulation factor X 9606 3.4.21.6 | Details
27 3IIT 1 A Activated factor Xa heavy chain 9606 3.4.21.6 | Details
28 3TK6 1 A Factor X heavy chain UNP RESIDUES 235-467 9606 3.4.21.6 | Details
29 3K9X 2 B, D PROTEIN (Coagulation factor X) CATALYTIC DOMAINS (UNP residues 235 to 472) 9606 3.4.21.6 | Details
30 4ZH8 1 A Coagulation factor X residues 235 - 488 9606 3.4.21.6 | Details
31 2XBX 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
32 2Y7Z 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN 9606 3.4.21.6 | Details
33 4ZHA 1 A Coagulation factor X residues 235-488 9606 3.4.21.6 | Details
34 2Y7X 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN 9606 3.4.21.6 | Details
35 2Y80 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN 9606 3.4.21.6 | Details
36 1Z6E 1 A Coagulation factor X UNP residues 235-468 9606 3.4.21.6 | Details
37 2WYG 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
38 2UWL 1 A COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
39 2J2U 1 A COAGULATION FACTOR X HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
40 2P3T 2 B Coagulation factor X CATALYTIC DOMAIN 9606 3.4.21.6 | Details
41 1FJS 1 A COAGULATION FACTOR XA HEAVY CHAIN, CATALYTIC DOMAIN 9606 3.4.21.6 | Details
42 2J34 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
43 2VH6 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
44 4Y7A 1 A Coagulation factor X 9606 3.4.21.6 | Details
45 4Y76 1 A Coagulation factor X 9606 3.4.21.6 | Details
46 2VVC 1 A, B ACTIVATED FACTOR XA HEAVY CHAIN PEPTIDASE S1 DOMAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
47 2VWM 1 A, B ACTIVATED FACTOR XA HEAVY CHAIN PEPTIDASE S1 DOMAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
48 2W3I 1 A COAGULATION FACTOR X, HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-468 9606 3.4.21.6 | Details
49 2J95 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
50 2XC0 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
51 3Q3K 1 A Activated factor Xa heavy chain UNP RESIDUES 235-467 9606 3.4.21.6 | Details
52 3M37 1 A Coagulation factor X Peptidase S1 9606 3.4.21.6 | Details
53 4Y79 1 A Coagulation factor X 9606 3.4.21.6 | Details
54 2Q1J 1 A Activated factor Xa heavy chain (EC 3.4.21.6) 9606 3.4.21.6 | Details
55 1C5M 1 D PROTEIN (COAGULATION FACTOR X) HEAVY CHAIN 9606 3.4.21.6 | Details
56 1LPG 2 B Blood coagulation factor Xa 9606 3.4.21.6 | Details
57 2J94 1 A COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
58 1G2L 1 A COAGULATION FACTOR X CATALYTIC DOMAIN 9606 3.4.21.6 | Details
59 1HCG 1 A BLOOD COAGULATION FACTOR XA 9606 3.4.21.6 | Details
60 1MQ6 1 A COAGULATION FACTOR X HEAVY CHAIN CATALYTIC DOMAIN 9606 3.4.21.6 | Details
61 5VOE 1 H Coagulation factor X residues 235-467 9606 3.4.21.6 | Details
62 2XBY 1 A ACTIVATED FACTOR XA HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-475 9606 3.4.21.6 | Details
63 1MQ5 1 A COAGULATION FACTOR X HEAVY CHAIN CATALYTIC DOMAIN 9606 3.4.21.6 | Details
64 2CJI 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
65 3HPT 2 B, D Coagulation factor X Activated factor Xa heavy chain: UNP residues 235-472 9606 3.4.21.6 | Details
66 2W3K 1 A COAGULATION FACTOR X, HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-468 9606 3.4.21.6 | Details
67 1NFW 1 A COAGULATION FACTOR XA, heavy chain 9606 3.4.21.6 | Details
68 2Y82 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN 9606 3.4.21.6 | Details
69 1NFY 1 A Coagulation factor XA, heavy chain 9606 3.4.21.6 | Details
70 2P93 1 A Factor Xa Residues 16-243 9606 3.4.21.6 | Details
71 2EI8 1 A Coagulation factor X, heavy chain RESIDUES 16-243 9606 3.4.21.6 | Details
72 3KQC 1 A factor Xa heavy chain residues 235-468 of factor X uncleaved sequence 9606 3.4.21.6 | Details
73 2D1J 1 A Coagulation factor X, heavy chain RESIDUES 16-243 9606 3.4.21.6 | Details
74 4BTI 2 B, F COAGULATION FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
75 1NFU 1 A COAGULATION FACTOR XA, HEAVY CHAIN 9606 3.4.21.6 | Details
76 1LPK 2 B Blood coagulation factor Xa 9606 3.4.21.6 | Details
77 2J38 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
78 2W26 1 A ACTIVATED FACTOR XA HEAVY CHAIN RESIDUES 235-468 9606 3.4.21.6 | Details
79 1V3X 1 A Coagulation factor X, HEAVY CHAIN Residues 16-243 9606 3.4.21.6 | Details
80 1F0R 1 A COAGULATION FACTOR XA ACTIVATED FACTOR XA, HEAVY CHAIN 9606 3.4.21.6 | Details
81 1F0S 1 A COAGULATION FACTOR XA ACTIVATED FACTOR XA, HEAVY CHAIN 9606 3.4.21.6 | Details
82 2P94 1 A Factor Xa Residues 16-244 9606 3.4.21.6 | Details
83 3KQB 1 A factor Xa heavy chain residues 235-468 of factor X uncleaved sequence 9606 3.4.21.6 | Details
84 1KSN 1 A COAGULATION FACTOR XA ACTIVATED FACTOR XA, HEAVY CHAIN 9606 3.4.21.6 | Details
85 1NFX 1 A COAGULATION FACTOR XA, heavy chain 9606 3.4.21.6 | Details
86 4BTU 2 B, F COAGULATION FACTOR X HEAVY CHAIN HEAVY CHAIN, RESIDUES 235-488 9606 3.4.21.6 | Details
87 2BOH 2 B COAGULATION FACTOR XA LIGHT CHAIN, RESIDUES 235-488 9606 3.4.21.6 | Details
88 1EZQ 1 A COAGULATION FACTOR XA ACTIVATED FACTOR XA, HEAVY CHAIN 9606 3.4.21.6 | Details
89 3TK5 1 A Factor X heavy chain UNP RESIDUES 235-467 9606 3.4.21.6 | Details
90 1WU1 1 A Coagulation factor X, heavy chain RESIDUES 16-243 9606 3.4.21.6 | Details
91 5K0H 1 A Coagulation factor X 9606 3.4.21.6 | Details
92 3M36 1 A Coagulation factor X Peptidase S1 9606 3.4.21.6 | Details
93 1XKA 2 C BLOOD COAGULATION FACTOR XA PROTEOLYTIC CLEAVAGE PRODUCT, GLA DOMAIN 9606 3.4.21.6 | Details
94 2BQ7 2 B FACTOR XA HEAVY CHAIN, RESIDUES 220-468 9606 3.4.21.6 | Details
95 3KQE 1 A factor Xa heavy chain residues 235-468 of factor X uncleaved sequence 9606 3.4.21.6 | Details
96 2EI6 1 A Coagulation factor X, heavy chain RESIDUES 16-243 9606 3.4.21.6 | Details
97 2H9E 1 H Coagulation factor X heavy chain catalytic domain 9606 3.4.21.6 | Details
98 3CS7 1 A Coagulation factor X Coagulation Factor X, Heavy Chain 9606 3.4.21.6 | Details
99 1LPZ 2 B Blood coagulation factor Xa 9606 3.4.21.6 | Details
100 3LIW 1 A Activated factor Xa heavy chain UNP RESIDUES 235-468 9606 3.4.21.6 | Details
101 2EI7 1 A Coagulation factor X, heavy chain RESIDUES 16-243 9606 3.4.21.6 | Details
102 5VOF 1 H Coagulation factor X residue 235-467 9606 3.4.21.6 | Details
103 2WYJ 1 A ACTIVATED FACTOR XA HEAVY CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 235-488 9606 3.4.21.6 | Details
104 4A7I 2 B ACTIVATED FACTOR XA HEAVY CHAIN XA ACTIVATED FACTOR X HEAVY CHAIN, RESIDUES 235-488 9606 3.4.21.6 | Details
105 2VVU 1 A ACTIVATED FACTOR XA HEAVY CHAIN CATALYTIC, RESIDUES 235-475 9606 3.4.21.6 | Details
106 3SW2 2 B Coagulation factor X Activated factor Xa heavy chain (UNP residues 235-472) 9606 3.4.21.6 | Details
107 2P95 1 A Factor Xa Residues 16-244 9606 3.4.21.6 | Details
108 1XKB 2 C, D BLOOD COAGULATION FACTOR XA PROTEOLYTIC CLEAVAGE PRODUCT, GLA DOMAIN 9606 3.4.21.6 | Details
109 3ENS 2 B, D Activated factor Xa heavy chain sequence database residues 235-472 9606 3.4.21.6 | Details
110 2G00 1 A Coagulation factor X PROTEOLYTIC CLEAVAGE PRODUCT Coagulation Factor X, Heavy Chain 9606 3.4.21.6 | Details
111 1IQG 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
112 2P16 1 A Coagulation factor X (EC 3.4.21.6) (Stuart factor) (Stuart-Prower factor) Coagulation Factor X, Heavy Chain 9606 3.4.21.6 | Details
113 2FZZ 1 A Coagulation factor X PROTEOLYTIC CLEAVAGE PRODUCT Coagulation Factor X, Heavy Chain 9606 3.4.21.6 | Details
114 1IQN 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
115 1LQD 2 B Blood coagulation factor Xa 9606 3.4.21.6 | Details
116 2RA0 1 A Coagulation factor X heavy chain, UNP residues 235-468 9606 3.4.21.6 | Details
117 4BTT 2 B, F COAGULATION FACTOR X HEAVY CHAIN, RESIDUES 235-488 9606 3.4.21.6 | Details
118 2BMG 2 B COAGULATION FACTOR X HEAVY CHAIN, RESIDUES 235-468 9606 3.4.21.6 | Details
119 1IQM 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
120 2PHB 1 A Coagulation factor X, heavy chain heavy chain 9606 3.4.21.6 | Details
121 3KQD 1 A factor Xa heavy chain residues 235-468 of factor X uncleaved sequence 9606 3.4.21.6 | Details
122 1IQI 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
123 1IQL 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
124 1IQH 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
125 2BQW 2 B FACTOR XA HEAVY CHAIN, RESIDUES 220-468 9606 3.4.21.6 | Details
126 1P0S 2 H Coagulation factor X precursor Factor Xa Heavy Chain 9606 3.4.21.6 | Details
127 1IQJ 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
128 1IOE 1 A COAGULATION FACTOR XA HEAVY CHAIN, CATALYTIC DOMAIN (RESIDUES 235-469) 9606 3.4.21.6 | Details
129 1IQF 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
130 2P3F 1 H Coagulation factor X Activated factor Xa heavy chain domain 9606 3.4.21.6 | Details
131 1IQK 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
132 1FAX 1 A FACTOR XA 9606 3.4.21.6 | Details
133 1IQE 1 A coagulation Factor Xa heavy chain, catalytic domain (residues 235-469) 9606 3.4.21.6 | Details
134 2BQ6 2 B FACTOR XA HEAVY CHAIN, RESIDUES 220-468 9606 3.4.21.6 | Details
135 1G2M 1 A COAGULATION FACTOR X CATALYTIC DOMAIN 9606 3.4.21.6 | Details
136 2GD4 2 B, H Coagulation factor, Stuart factor, Stuart-Prower factor, Contains: Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain Residues 235-475 9606 3.4.21.6 | Details