Sequence Similarity Clusters for the Entities in PDB 1LPG

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 40 1205
95 % 23 40 1431 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 23 40 1455
70 % 23 40 1461
50 % 31 74 793
40 % 31 74 823
30 % 32 79 772
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 136 209
95 % 56 136 268 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 56 136 279
70 % 56 137 320
50 % 546 710 14
40 % 1231 1885 4
30 % 1238 1899 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Y6D 2 B Coagulation factor X FACTOR X LIGHT CHAIN, UNP residues 46-179 9606 3.4.21.6 | Details
2 2Y81 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
3 2VH0 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
4 2UWP 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
5 4Y7B 2 B Coagulation factor X Disulphide linked to other chain UNP residues 46-179 9606 3.4.21.6 | Details
6 2UWO 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
7 2J4I 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
8 4Y71 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
9 4ZH8 2 B Coagulation factor X residues 43-179 9606 3.4.21.6 | Details
10 2Y7Z 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
11 4ZHA 2 B Coagulation factor X residues 46-179 9606 3.4.21.6 | Details
12 2Y7X 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
13 2Y80 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
14 2WYG 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
15 2UWL 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
16 2J2U 2 B COAGULATION FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
17 2J34 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
18 2VH6 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
19 4Y7A 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
20 4Y76 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
21 2J95 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
22 4Y79 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
23 1LPG 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
24 2J94 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
25 2CJI 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
26 1NFW 2 B COAGULATION FACTOR XA, light chain 9606 3.4.21.6 | Details
27 2Y82 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
28 1NFY 2 B Coagulation factor XA, light chain 9606 3.4.21.6 | Details
29 1LPK 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
30 2J38 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
31 1F0R 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
32 1F0S 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
33 1KSN 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
34 1NFX 2 B Coagulation factor XA, light chain 9606 3.4.21.6 | Details
35 2BOH 1 A COAGULATION FACTOR XA LIGHT CHAIN, RESIDUES 126-234 9606 3.4.21.6 | Details
36 1EZQ 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
37 1LPZ 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
38 2WYJ 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
39 1LQD 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
40 1P0S 1 L Coagulation factor X precursor Factor Xa Light Chain 9606 3.4.21.6 | Details