Sequence Similarity Clusters for the Entities in PDB 1LPG

Entity #1 | Chains: A
Blood coagulation factor Xa protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 40 1295
95 % 23 40 1527 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 23 40 1552
70 % 23 40 1555
50 % 31 74 836
40 % 31 74 860
30 % 32 79 809
Entity #2 | Chains: B
Blood coagulation factor Xa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 136 218
95 % 56 136 277 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 56 136 289
70 % 56 137 334
50 % 547 713 15
40 % 1239 1900 4
30 % 1246 1914 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4YLQ 1 L Coagulation factor VII BLOOD COAGULATION FACTOR VIIA LIGHT CHAIN, UNP residues 61-212 9606 3.4.21.21 | Details
2 4Y6D 2 B Coagulation factor X FACTOR X LIGHT CHAIN, UNP residues 46-179 9606 3.4.21.6 | Details
3 2Y81 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
4 2VH0 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
5 3TH2 1 L Coagulation factor VII light chain 9606 3.4.21.21 | Details
6 2UWP 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
7 4Y7B 2 B Coagulation factor X Disulphide linked to other chain UNP residues 46-179 9606 3.4.21.6 | Details
8 4IBL 1 L Coagulation factor VII Light Chain 9606 3.4.21.21 | Details
9 2UWO 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
10 2J4I 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
11 2A2Q 1 L Coagulation factor VII Light chain, residues 61-212 9606 3.4.21.21 | Details
12 4Y71 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
13 2C4F 2 L COAGULATION FACTOR VII PRECURSOR FACTOR VII LIGHT CHAIN, RESIDUES 61-202 9606 3.4.21.21 | Details
14 3TH4 1 L Coagulation factor VII light chain 9606 3.4.21.21 | Details
15 4ZH8 2 B Coagulation factor X residues 43-179 9606 3.4.21.6 | Details
16 2Y7Z 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
17 2AER 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
18 4ZHA 2 B Coagulation factor X residues 46-179 9606 3.4.21.6 | Details
19 2Y7X 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
20 2Y80 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
21 2WYG 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
22 2UWL 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
23 2J2U 2 B COAGULATION FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
24 2J34 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
25 2VH6 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
26 1DAN 1 L BLOOD COAGULATION FACTOR VIIA light chain 9606 3.4.21.21 | Details
27 4Y7A 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
28 4Y76 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
29 2J95 2 B ACTIVATED FACTOR XA LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
30 4Y79 2 B Coagulation factor X UNP residues 46-179 9606 3.4.21.6 | Details
31 1LPG 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
32 2FIR 1 L Coagulation factor VII Light chain 9606 3.4.21.21 | Details
33 2J94 2 B COAGULATION FACTOR X DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
34 2CJI 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
35 1Z6J 1 L Coagulation factor VII Light Chain 9606 3.4.21.21 | Details
36 1NFW 2 B COAGULATION FACTOR XA, light chain 9606 3.4.21.6 | Details
37 2Y82 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
38 1NFY 2 B Coagulation factor XA, light chain 9606 3.4.21.6 | Details
39 2FLB 1 L Coagulation factor VII light chain, residues 61-212 9606 3.4.21.21 | Details
40 1LPK 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
41 2J38 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
42 1F0R 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
43 1F0S 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
44 1O5D 1 L Coagulation factor VII light chain 9606 3.4.21.21 | Details
45 2EC9 1 L Coagulation factor VII residues 1-142 9606 3.4.21.21 | Details
46 1KSN 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
47 1WTG 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
48 1NFX 2 B Coagulation factor XA, light chain 9606 3.4.21.6 | Details
49 2BOH 1 A COAGULATION FACTOR XA LIGHT CHAIN, RESIDUES 126-234 9606 3.4.21.6 | Details
50 1EZQ 2 B COAGULATION FACTOR XA FACTOR X LIGHT CHAIN 9606 3.4.21.6 | Details
51 1FAK 1 L PROTEIN (BLOOD COAGULATION FACTOR VIIA) LIGHT CHAIN 9606 3.4.21.21 | Details
52 2ZWL 1 L Factor VII light chain UNP residues 61-212 9606 3.4.21.21 | Details
53 1LPZ 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
54 2WYJ 2 B FACTOR X LIGHT CHAIN DISULPHIDE LINKED TO OTHER CHAIN ACTIVATED DESGLA, RESIDUES 46-179 9606 3.4.21.6 | Details
55 3ELA 1 L Coagulation factor VIIA light chain UNP residues 61-212 9606 3.4.21.21 | Details
56 1W0Y 2 L BLOOD COAGULATION FACTOR VIIA FACTOR VII HEAVY CHAIN, RESIDUES 61-202 9606 3.4.21.21 | Details
57 1WUN 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
58 2FLR 1 L Coagulation factor VII light chain, residues 61-212 9606 3.4.21.21 | Details
59 2B7D 1 L Coagulation factor VII light chain 9606 3.4.21.21 | Details
60 1LQD 1 A Blood coagulation factor Xa light chain 9606 3.4.21.6 | Details
61 2AEI 1 L Coagulation factor VII LIGHT CHAIN 9606 3.4.21.21 | Details
62 4ZMA 1 L Coagulation factor VII 9606 3.4.21.21 | Details
63 1WQV 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
64 2ZZU 1 L Factor VII light chain UNP RESIDUES 61-212 9606 3.4.21.21 | Details
65 1WSS 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
66 2F9B 1 L Coagulation factor VII light chain, residues 61-212 9606 3.4.21.21 | Details
67 2ZP0 1 L Factor VII light chain 9606 3.4.21.21 | Details
68 1P0S 1 L Coagulation factor X precursor Factor Xa Light Chain 9606 3.4.21.6 | Details
69 1WV7 1 L Coagulation factor VII Factor VII light chain 9606 3.4.21.21 | Details
70 3TH3 1 L Coagulation factor VII light chain Coagulation Factor VII 9606 3.4.21.21 | Details
71 1W2K 2 L BLOOD COAGULATION FACTOR VIIA FACTOR VII HEAVY CHAIN, RESIDUES 61-202 9606 3.4.21.21 | Details
72 1PFX 2 L FACTOR IXA 9823 3.4.21.22 | Details
73 2B8O 1 L Coagulation factor VII light chain 9606 3.4.21.21 | Details
74 1X7A 2 L Coagulation Factor IX, light chain light chain 9823 3.4.21.22 | Details