Sequence Similarity Clusters for the Entities in PDB 1LPF

Entity #1 | Chains: A,B
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33407
95 % 4 4 4809 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 4 4 4834
70 % 7 7 3156
50 % 20 22 658
40 % 29 32 509
30 % 103 129 162

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures