Sequence Similarity Clusters for the Entities in PDB 1LPF

Entity #1 | Chains: A,B
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32217
95 % 4 4 4609 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 4 4 4630
70 % 7 7 3039
50 % 19 21 680
40 % 27 30 525
30 % 101 127 160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.